cat dicomSend.py

import glob
import subprocess
import os
import signal
import sys
import time
import fileinput
import connector
import transliterate


server = '192.168.1.43 4242' # Сервер и порт куда будем посылать снимки
fileList = open("/root/python/files_to_copy", "r") # файл со списком изображений(построчно), пример: (/root/DCM/555_777.DCM) 

from datetime import datetime
now= datetime.now()

while True:
        lineFileList = fileList.readline()
        if not lineFileList:
                break
        filePath=lineFileList.strip()
        fileName=filePath.split('/')[-1]

        cursor = connector.cnx.cursor()
        select_query = (f"select * from DicomSend where FileName=%s")
        cursor.execute(select_query,[fileName])
        row = cursor.fetchone()

        if row == None:

                dcmToXml=subprocess.Popen("dcm2xml +M +Wb "+ filePath + " " + filePath + ".xml", shell=True)
                dcmToXml.communicate()
                fin = open(filePath + ".xml",encoding = "WINDOWS-1251")
                fout = open(filePath +".xml.mod", "wt")
                for line in fin:
                        fout.write( line.replace('ISO-8859-5', 'UTF-8') )
                fin.close()
                fout.close()

                fullpathxml = filePath +'.xml.mod'

                import xml.etree.ElementTree as ET
                tree = ET.parse(fullpathxml)

                PatientName=tree.findall('data-set/element[@name="PatientName"]')[0].text
                if PatientName:
                        PatientNameTrans=transliterate.transliterate(PatientName)
                else:
                        PatientNameTrans="NameErr"

                tree.findall('data-set/element[@name="PatientName"]')[0].text = PatientNameTrans

                BodyPE=tree.findall('data-set/element[@name="BodyPartExamined"]')[0].text
                if BodyPE:
                        BodyPETrans=transliterate.transliterate(BodyPE)
                else:
                        BodyPETrans="BodyErr"

                tree.findall('data-set/element[@name="BodyPartExamined"]')[0].text = BodyPETrans

                try:
                        ViewPos=tree.findall('data-set/element[@name="ViewPosition"]')[0].text
                        ViewPosTrans=transliterate.transliterate(ViewPos)
                except:
                        ViewPosTrans="ViewErr"

                tree.findall('data-set/element[@name="ViewPosition"]')[0].text = ViewPosTrans

                tree.write(fullpathxml)

                xmlToDcm=subprocess.Popen("xml2dcm -f "+ fullpathxml + " "+ fullpathxml +".dcm", shell=True)
                xmlToDcm.communicate()

                dcmSend=subprocess.Popen("dcmsend -nuc +ma "+server+" "+fullpathxml+".dcm", shell=True, text=True, stderr=subprocess.PIPE)
                data=dcmSend.communicate()
                for line in data:
                        if line:
                                line = line.strip()
                line=line.split(':')[0]
                if line=='W':
                        cursor = connector.cnx.cursor()
                        insert_query=(f"INSERT INTO DicomSend (id, FileName, SendDate, PatientName) values(NULL, %s, NULL, %s)")
                        cursor.execute(insert_query,[fileName, PatientNameTrans])
                        connector.cnx.commit()
                        fullpath='/'.join(fullpathxml.split('/')[:-1])
                        for xmlpath in glob.iglob(os.path.join(fullpath, '*.xml')):
                                os.remove(xmlpath)
                        for modpath in glob.iglob(os.path.join(fullpath, '*.mod')):
                                os.remove(modpath)
                        for moddcmpath in glob.iglob(os.path.join(fullpath, '*.mod.dcm')):
                                os.remove(moddcmpath)
                else:
                        print('ERROR. ORTHANC NOT ANSWER = ',now)
        else:
                print('RECORD IS DUPLICATED = ', now)